- * Returns the number of duplications of this Phylogeny (int). A return
- * value of -1 indicates that the number of duplications is unknown.
- */
- // public int getNumberOfDuplications() {
- // return _number_of_duplications;
- // } // getNumberOfDuplications()
- /**
- * Sets the number of duplications of this Phylogeny (int). A value of -1
- * indicates that the number of duplications is unknown.
- *
- * @param clean_nh
- * set to true for clean NH format
- */
- // public void setNumberOfDuplications( int i ) {
- // if ( i < 0 ) {
- // _number_of_duplications = -1;
- // }
- // else {
- // _number_of_duplications = i;
- // }
- // } // setNumberOfDuplications( int )
- /**