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version 0.9910 beta
[jalview.git]
/
forester
/
java
/
src
/
org
/
forester
/
phylogeny
/
data
/
ProteinDomain.java
diff --git
a/forester/java/src/org/forester/phylogeny/data/ProteinDomain.java
b/forester/java/src/org/forester/phylogeny/data/ProteinDomain.java
index
3adcdfd
..
921ff25
100644
(file)
--- a/
forester/java/src/org/forester/phylogeny/data/ProteinDomain.java
+++ b/
forester/java/src/org/forester/phylogeny/data/ProteinDomain.java
@@
-33,7
+33,7
@@
import org.forester.util.ForesterUtil;
public class ProteinDomain implements PhylogenyData {
public class ProteinDomain implements PhylogenyData {
- final public static double CONFIDENCE_DEFAULT = 0.0;
+ final public static double CONFIDENCE_DEFAULT = -1;
final public static String IDENTIFIER_DEFAULT = "";
final private String _name;
final private int _from;
final public static String IDENTIFIER_DEFAULT = "";
final private String _name;
final private int _from;
@@
-78,7
+78,7
@@
public class ProteinDomain implements PhylogenyData {
sb.append( " " );
sb.append( getId() );
}
sb.append( " " );
sb.append( getId() );
}
- if ( getConfidence() != CONFIDENCE_DEFAULT ) {
+ if ( getConfidence() >= 0 ) {
sb.append( " " );
sb.append( getConfidence() );
}
sb.append( " " );
sb.append( getConfidence() );
}