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[jalview.git]
/
forester
/
java
/
src
/
org
/
forester
/
surfacing
/
DomainLengths.java
diff --git
a/forester/java/src/org/forester/surfacing/DomainLengths.java
b/forester/java/src/org/forester/surfacing/DomainLengths.java
index
37ebfdc
..
1018aea
100644
(file)
--- a/
forester/java/src/org/forester/surfacing/DomainLengths.java
+++ b/
forester/java/src/org/forester/surfacing/DomainLengths.java
@@
-22,7
+22,7
@@
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
//
// Contact: phylosoft @ gmail . com
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
//
// Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
package org.forester.surfacing;
package org.forester.surfacing;
@@
-31,17
+31,16
@@
import java.util.List;
import java.util.SortedMap;
import java.util.TreeMap;
import java.util.SortedMap;
import java.util.TreeMap;
-import org.forester.protein.DomainId;
import org.forester.species.Species;
import org.forester.util.BasicDescriptiveStatistics;
import org.forester.util.DescriptiveStatistics;
public class DomainLengths {
import org.forester.species.Species;
import org.forester.util.BasicDescriptiveStatistics;
import org.forester.util.DescriptiveStatistics;
public class DomainLengths {
- final DomainId _domain_id;
+ final String _domain_id;
final SortedMap<Species, DescriptiveStatistics> _length_statistics;
final SortedMap<Species, DescriptiveStatistics> _length_statistics;
- public DomainLengths( final DomainId domain_id ) {
+ public DomainLengths( final String domain_id ) {
_domain_id = domain_id;
_length_statistics = new TreeMap<Species, DescriptiveStatistics>();
}
_domain_id = domain_id;
_length_statistics = new TreeMap<Species, DescriptiveStatistics>();
}
@@
-91,7
+90,7
@@
public class DomainLengths {
return ( species_mean - population_mean ) / population_sd;
}
return ( species_mean - population_mean ) / population_sd;
}
- public DomainId getDomainId() {
+ public String getDomainId() {
return _domain_id;
}
return _domain_id;
}