+
+ private void addDomainLengths( final DomainLengths domain_lengths ) {
+ if ( getDomainLengths().containsKey( domain_lengths.getDomainId() ) ) {
+ throw new IllegalArgumentException( "domain lengths for [" + domain_lengths.getDomainId()
+ + "] already added" );
+ }
+ getDomainLengths().put( domain_lengths.getDomainId(), domain_lengths );
+ }
+
+ private void addLength( final String domain_id, final Species species, final int domain_length ) {
+ if ( !getDomainLengths().containsKey( domain_id ) ) {
+ addDomainLengths( new DomainLengths( domain_id ) );
+ }
+ getDomainLengths().get( domain_id ).addLength( species, domain_length );
+ }
+
+ private SortedMap<String, DomainLengths> getDomainLengths() {
+ return _domain_lengths;
+ }