- #base_name = nil
- #if input.downcase.end_with?( "_ni.fasta" )
- # base_name = input[ 0 .. input.length - 10 ]
- #elsif input.downcase.end_with?( ".fasta" )
- # base_name = input[ 0 .. input.length - 7 ]
- #elsif input.downcase.end_with?( "_ni.fsa" )
- # base_name = input[ 0 .. input.length - 8 ]
- #elsif input.downcase.end_with?( ".fsa" )
- # base_name = input[ 0 .. input.length - 5 ]
- #else
- # base_name = input
- #end
-