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[jalview.git]
/
forester
/
ruby
/
evoruby
/
lib
/
evo
/
io
/
parser
/
uniprot_parser.rb
diff --git
a/forester/ruby/evoruby/lib/evo/io/parser/uniprot_parser.rb
b/forester/ruby/evoruby/lib/evo/io/parser/uniprot_parser.rb
index
28a5730
..
ec2b9f0
100644
(file)
--- a/
forester/ruby/evoruby/lib/evo/io/parser/uniprot_parser.rb
+++ b/
forester/ruby/evoruby/lib/evo/io/parser/uniprot_parser.rb
@@
-37,9
+37,11
@@
module Evoruby
dr = []
read = false
File.open( @file ).each do | line |
dr = []
read = false
File.open( @file ).each do | line |
- if line.index ID == 0
+ if line.index( ID ) == 0
+ puts line
ids.each do | id |
ids.each do | id |
- if line.index id == 0
+ puts " " + id
+ if line.index( id ) == 0
read = true
break
end
read = true
break
end
@@
-51,7
+53,7
@@
module Evoruby
e = UniprotEntry.new
e.de = de
e.dr = dr
e = UniprotEntry.new
e.de = de
e.dr = dr
- entries << e
+ entries[ id ] = e
de = []
dr = []
else
de = []
dr = []
else