domains_mapfile_name = get_file( files, phylogeny_id, DOMAINS_MAPFILE_SUFFIX )
seqs_file_name = get_seq_file( files, phylogeny_id )
domains_mapfile_name = get_file( files, phylogeny_id, DOMAINS_MAPFILE_SUFFIX )
seqs_file_name = get_seq_file( files, phylogeny_id )