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Merge branch 'develop' into features/JAL-518_justify_seqs_in_region
[jalview.git]
/
help
/
help
/
html
/
colourSchemes
/
clustal.html
diff --git
a/help/help/html/colourSchemes/clustal.html
b/help/help/html/colourSchemes/clustal.html
index
b3d44db
..
f57d53f
100755
(executable)
--- a/
help/help/html/colourSchemes/clustal.html
+++ b/
help/help/html/colourSchemes/clustal.html
@@
-61,42
+61,42
@@
td {
<tr>
<td rowspan="2">Hydrophobic</td>
<td rowspan="2" bgcolor="#80a0f0">BLUE</td>
<tr>
<td rowspan="2">Hydrophobic</td>
<td rowspan="2" bgcolor="#80a0f0">BLUE</td>
- <td>A,I,L,M,F,W,V</td>
- <td>{>60%, WLVIMAFCHP}</td>
+ <td>A,C,I,L,M,F,W,V</td>
+ <td>{>60%, WLVIMAFCYHP}</td>
</tr>
<tr>
<td>C</td>
</tr>
<tr>
<td>C</td>
- <td>{>60%, WLVIMAFCHP}</td>
+ <td>{>60%, WLVIMAFCYHP}</td>
</tr>
<tr>
<td>Positive charge</td>
<td bgcolor="#f01505">RED</td>
<td>K,R</td>
</tr>
<tr>
<td>Positive charge</td>
<td bgcolor="#f01505">RED</td>
<td>K,R</td>
- <td>{>60%,KR},{>80%, K,R,Q}</td>
+ <td>{>60%,KR},{>85%, K,R,Q}</td>
</tr>
<tr>
<td rowspan="2">Negative charge</td>
<td rowspan="2" bgcolor="#c048c0">MAGENTA</td>
<td>E</td>
</tr>
<tr>
<td rowspan="2">Negative charge</td>
<td rowspan="2" bgcolor="#c048c0">MAGENTA</td>
<td>E</td>
- <td>{>60%,KR},{>50%,QE},{>85%,E,Q,D}</td>
+ <td>{>60%,KR},{>50%,QE},{>50%,ED},{>85%,E,Q,D}</td>
</tr>
<tr>
<td>D</td>
</tr>
<tr>
<td>D</td>
- <td>{>60%,KR}, {>85%, K,R,Q}, {>50%,ED}</td>
+ <td>{>60%,KR}, {>85%, D,E,N}, {>50%,ED}</td>
</tr>
<tr>
<td rowspan="3">Polar</td>
<td rowspan="3" bgcolor="#15c015">GREEN</td>
<td>N</td>
</tr>
<tr>
<td rowspan="3">Polar</td>
<td rowspan="3" bgcolor="#15c015">GREEN</td>
<td>N</td>
- <td>{>50%, N}, {>85%, N,Y}</td>
+ <td>{>50%, N}, {>85%, N,D}</td>
</tr>
<tr>
<td>Q</td>
</tr>
<tr>
<td>Q</td>
- <td>{>60%,KR},{>50%,QE},{>85%,Q,E,K,R}</td>
+ <td>{>60%,KR},{>50%,QE},{>85%,Q,T,K,R}</td>
</tr>
<tr>
<td>S,T</td>
</tr>
<tr>
<td>S,T</td>
- <td>{>60%, WLVIMAFCHP}, {>50%, TS}, {>85%,S,T}</td>
+ <td>{>60%, WLVIMAFCYHP}, {>50%, TS}, {>85%,S,T}</td>
</tr>
<tr>
<td>Cysteines</td>
</tr>
<tr>
<td>Cysteines</td>
@@
-120,7
+120,7
@@
td {
<td>Aromatic</td>
<td bgcolor="#15a4a4">CYAN</td>
<td>H,Y</td>
<td>Aromatic</td>
<td bgcolor="#15a4a4">CYAN</td>
<td>H,Y</td>
- <td>{>60%, WLVIMAFCHP}, {>85%,
+ <td>{>60%, WLVIMAFCYHP}, {>85%,
W,Y,A,C,P,Q,F,H,I,L,M,V}</td>
</tr>
<tr>
W,Y,A,C,P,Q,F,H,I,L,M,V}</td>
</tr>
<tr>