- <tocitem text="Search" target="search"/>\r
- <tocitem text="Wrap Alignment" target="wrap"/>\r
- <tocitem text="Overview Window" target ="overview"/>\r
- <tocitem text="Sequence Features" target ="seqfeatures"/>\r
- </tocitem>\r
- <tocitem text="Input /Output" target="io"/>\r
+ <tocitem text="Cursor Mode" target="cursor"/>\r
+ <tocitem text="Selection Area Based Editing" target="edit.selareas"/>\r
+ <tocitem text="User Defined Sequence Features" target="search"/>\r
+ <tocitem text="Sequence Feature Groups" target="seqfeatures"/>\r
+ <tocitem text="Sequence Feature Settings" target="seqfeatures.settings"/>\r
+ <tocitem text="Extended Sequence Feature Input File" target="features.fileformat"/>\r
+ <tocitem text="Annotations File" target="annotations.fileformat"/>\r
+ <tocitem text="Colour by Annotation Value" target="colours.annotation"/>\r
+ <tocitem text="Modeller PIR File IO" target="io.modellerpir"/>\r
+ </tocitem>\r
+ <tocitem text="Release History" target="release"/>\r
+ <tocitem text="Alignment Annotations" target ="alannotation" expand="false">\r
+ <tocitem text="Conservation" target="calcs.alconserv"/>\r
+ <tocitem text="Quality" target="calcs.alquality"/>\r
+ <tocitem text="Annotations File Format" target="annotations.fileformat"/>\r
+ </tocitem>\r
+ <tocitem text="Input / Output" target="io"/>\r
+ <tocitem text="Key Strokes" target="keys"/>\r