- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
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<p><strong>Alignment Consensus Annotation</strong></p>
<p>The consensus displayed below the alignment is the percentage of the modal
<body>
<p><strong>Alignment Consensus Annotation</strong></p>
<p>The consensus displayed below the alignment is the percentage of the modal
You can choose to ignore gaps in the calculation by right clicking on the label
"Consensus" to the left of the consensus bar chart.
<p>If the modal value is shared by more than 1 residue, a "+" symbol
You can choose to ignore gaps in the calculation by right clicking on the label
"Consensus" to the left of the consensus bar chart.
<p>If the modal value is shared by more than 1 residue, a "+" symbol
<p><strong>Sequence logo</strong></p>
By clicking on the label you can also activate the sequence logo. It
indicates the relative amount of residues per column which can be
<p><strong>Sequence logo</strong></p>
By clicking on the label you can also activate the sequence logo. It
indicates the relative amount of residues per column which can be
- estimated by it's size in the logo. The tooltip of a column gives the
- exact numbers for all occuring residues.
+ estimated by its size in the logo. The tooltip of a column gives the
+ exact numbers for all occurring residues.
<br />If columns of the alignment are very diverse, then it can
sometimes be difficult to see the sequence logo - in this case, right
click on the annotation row label and select
<br />If columns of the alignment are very diverse, then it can
sometimes be difficult to see the sequence logo - in this case, right
click on the annotation row label and select