- <li>Select "<a href="seqfeatures.html">Sequence Features</a>" from\r
- the "View" menu, which retrieves any uniprot sequence\r
- records associated with the sequences in the alignment. If, for a\r
- particular sequence's uniprot record there\r
- are any cross-references to PDB structures, then these will be\r
- added to its list of associated database ids.</li>\r
- <li>Retrieve sequences from the PDB using the <a\r
- href="seqfetch.html">Sequence Fetcher</a>. Any sequences retrieved\r
- with this service are automatically associated with their source\r
- database entry. For PDB sequences, simply select PDB as the database\r
- and enter your known PDB id (appended with ':' and a chain code, if\r
- desired).</li>\r
+ <li>From File - You can load a PDB file from the local machine or network and \r
+ associate it with the selected sequence. PDB files associated in this way \r
+ will also be saved in the <a href="jalarchive.html">Jalview Archive file</a>. <br>\r
+ </li>\r
+ <li>Enter PDB Id - Jalview will use WSDBFetch, provided by the EBI, to fetch \r
+ the PDB file with the entered Id.<br>\r
+ </li>\r
+ <li>Discover PDB Ids - Jalview uses WSDBFetch, provided by the EBI, to discover \r
+ PDB ids for all the sequences in the alignment which have valid Uniprot names \r
+ / accession ids. </li>\r