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JAL-3454 tidy comments
[jalview.git]
/
help
/
html
/
memory.html
diff --git
a/help/html/memory.html
b/help/html/memory.html
index
288bd39
..
9437a60
100755
(executable)
--- a/
help/html/memory.html
+++ b/
help/html/memory.html
@@
-1,7
+1,7
@@
<html>
<!--
<html>
<!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*
* This file is part of Jalview.
*
@@
-63,15
+63,13
@@
file. You can obtain a JNLP file with modified memory settings
from our service with the following link (replace 2G with
desired memory in G or M):<br /> <a
file. You can obtain a JNLP file with modified memory settings
from our service with the following link (replace 2G with
desired memory in G or M):<br /> <a
- href="http://www.jalview.org/services/launchApp?jvm-max-heap=2G"
- >http://www.jalview.org/services/launchApp?jvm-max-heap=2G</a>
+ href="http://www.jalview.org/services/launchApp?jvm-max-heap=2G">http://www.jalview.org/services/launchApp?jvm-max-heap=2G</a>
</p>
<p>
Alternatively, if you want to create your own JNLP file then
please download the latest JNLP file from <a
</p>
<p>
Alternatively, if you want to create your own JNLP file then
please download the latest JNLP file from <a
- href="http://www.jalview.org/webstart/jalview.jnlp"
- >http://www.jalview.org/webstart/jalview.jnlp</a> and modify the
- max-heap-size parameter for the j2se tag in the
+ href="http://www.jalview.org/webstart/jalview.jnlp">http://www.jalview.org/webstart/jalview.jnlp</a>
+ and modify the max-heap-size parameter for the j2se tag in the
<resources> element. e.g.
<pre>
<j2se version="1.7+" initial-heap-size="500M" max-heap-size="1000M"/>
<resources> element. e.g.
<pre>
<j2se version="1.7+" initial-heap-size="500M" max-heap-size="1000M"/>
@@
-109,6
+107,7
@@
lax.nl.java.option.java.heap.size.initial=500m
The lines you need to change are in the <em>Info.plist</em>
file inside the <em>Jalview.app/Contents</em> directory
(which is where the installAnywhere installation was made) :
The lines you need to change are in the <em>Info.plist</em>
file inside the <em>Jalview.app/Contents</em> directory
(which is where the installAnywhere installation was made) :
+
<pre>
<key&ht;VMOptions</key&ht;
<pre>
<key&ht;VMOptions</key&ht;
@@
-116,7
+115,7
@@
lax.nl.java.option.java.heap.size.initial=500m
! <string>-Xms2M</string>
! <string>-Xmx64M</string>
</array>
! <string>-Xms2M</string>
! <string>-Xmx64M</string>
</array>
-</pre> Exchange the above two string tags for : <pre>
+</pre>Exchange the above two string tags for : <pre>
<string>-Xms500M</string>
<string>-Xmx1000M</string>
</pre>
<string>-Xms500M</string>
<string>-Xmx1000M</string>
</pre>
@@
-126,6
+125,11
@@
lax.nl.java.option.java.heap.size.initial=500m
the file and try to start Jalview in the normal way. If it doesn't
start, see below...</li>
</ul>
the file and try to start Jalview in the normal way. If it doesn't
start, see below...</li>
</ul>
+ <p>
+ <em>Please Note:</em> We do modify the default memory settings in
+ Jalview from time to time, so you may find different numbers to
+ those shown in the examples above.
+ </p>
<font size="3"><em>Jalview doesn't start... What do the
memory settings mean ?<a name="memsetting"></a>
</em></font>
<font size="3"><em>Jalview doesn't start... What do the
memory settings mean ?<a name="memsetting"></a>
</em></font>
@@
-141,6
+145,12
@@
lax.nl.java.option.java.heap.size.initial=500m
enlighten us if you know better!). Our experiments found 1000m to be
the biggest setting that could be used on a 1GB machine. Just try
reducing the sizes until Jalview starts up properly!</p>
enlighten us if you know better!). Our experiments found 1000m to be
the biggest setting that could be used on a 1GB machine. Just try
reducing the sizes until Jalview starts up properly!</p>
+ <p>
+ We increased the default memory in Jalview 2.10.5 to 1G. To launch
+ Jalview with the pre 2.10.5 default memory allocation, use the <a
+ href="http://www.jalview.org/webstart/jalview_256MB.jnlp">Jalview
+ 256MB JNLP</a>.
+ </p>
<p> </p>
</body>
</html>
<p> </p>
</body>
</html>