git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
Updated images
[jalview.git]
/
help
/
html
/
misc
/
aminoAcids.html
diff --git
a/help/html/misc/aminoAcids.html
b/help/html/misc/aminoAcids.html
index
9e25c35
..
d675dff
100755
(executable)
--- a/
help/html/misc/aminoAcids.html
+++ b/
help/html/misc/aminoAcids.html
@@
-14,8
+14,6
@@
td {
\r
\r
<div align="center">
\r
\r
\r
<div align="center">
\r
- <h2><br>
\r
- </h2>
\r
<table width="450" BORDER ="5" cellpadding="3" BGCOLOR="#FFFFFF">
\r
<tr>
\r
<td width="15">A</td>
\r
<table width="450" BORDER ="5" cellpadding="3" BGCOLOR="#FFFFFF">
\r
<tr>
\r
<td width="15">A</td>
\r
@@
-28,7
+26,7
@@
td {
GCC<br>
\r
GCA<br>
\r
GCG</td>
\r
GCC<br>
\r
GCA<br>
\r
GCG</td>
\r
- <td width="125"><img src="alachem.gif" width="102" height="61"></td>
\r
+ <td width="125"><img src="ala.jpg" width="94" height="81"></td>
\r
</tr>
\r
<tr>
\r
<td>B</td>
\r
</tr>
\r
<tr>
\r
<td>B</td>
\r
@@
-47,7
+45,7
@@
td {
neutral </td>
\r
<td>TGT<br>
\r
TGC</td>
\r
neutral </td>
\r
<td>TGT<br>
\r
TGC</td>
\r
- <td><img src="cyschem.gif" width="102" height="81"></td>
\r
+ <td><img src="cys.jpg" width="82" height="95"></td>
\r
</tr>
\r
<tr>
\r
<td>D</td>
\r
</tr>
\r
<tr>
\r
<td>D</td>
\r
@@
-58,7
+56,7
@@
td {
charged (-) </td>
\r
<td>GAT<br>
\r
GAC</td>
\r
charged (-) </td>
\r
<td>GAT<br>
\r
GAC</td>
\r
- <td><img src="aspchem.gif" width="102" height="104"></td>
\r
+ <td><img src="aspartate.jpg" width="95" height="103"></td>
\r
</tr>
\r
<tr>
\r
<td>E</td>
\r
</tr>
\r
<tr>
\r
<td>E</td>
\r
@@
-69,7
+67,7
@@
td {
charged (-) </td>
\r
<td>GAA<br>
\r
GAG</td>
\r
charged (-) </td>
\r
<td>GAA<br>
\r
GAG</td>
\r
- <td><img src="gluchem.gif" width="102" height="127"></td>
\r
+ <td><img src="glutamate.jpg" width="93" height="128"></td>
\r
</tr>
\r
<tr>
\r
<td>F</td>
\r
</tr>
\r
<tr>
\r
<td>F</td>
\r
@@
-80,7
+78,7
@@
td {
neutral</td>
\r
<td>TTT<br>
\r
TTC</td>
\r
neutral</td>
\r
<td>TTT<br>
\r
TTC</td>
\r
- <td><img src="phechem.gif" width="102" height="125"></td>
\r
+ <td><img src="phe.jpg" width="87" height="134"></td>
\r
</tr>
\r
<tr>
\r
<td>G</td>
\r
</tr>
\r
<tr>
\r
<td>G</td>
\r
@@
-91,7
+89,7
@@
td {
GGC<br>
\r
GGA<br>
\r
GGG</td>
\r
GGC<br>
\r
GGA<br>
\r
GGG</td>
\r
- <td><img src="glychem.gif" width="102" height="58"></td>
\r
+ <td><img src="gly.jpg" width="97" height="79"></td>
\r
</tr>
\r
<tr>
\r
<td>H</td>
\r
</tr>
\r
<tr>
\r
<td>H</td>
\r
@@
-103,7
+101,7
@@
td {
charged (+) </td>
\r
<td>CAT<br>
\r
CAC</td>
\r
charged (+) </td>
\r
<td>CAT<br>
\r
CAC</td>
\r
- <td><img src="hischem.gif" width="102" height="116"></td>
\r
+ <td><img src="his.jpg" width="97" height="142"></td>
\r
</tr>
\r
<tr>
\r
<td>I</td>
\r
</tr>
\r
<tr>
\r
<td>I</td>
\r
@@
-115,7
+113,7
@@
td {
<td>ATT<br>
\r
ATC<br>
\r
ATA</td>
\r
<td>ATT<br>
\r
ATC<br>
\r
ATA</td>
\r
- <td><img src="ilechem.gif" width="102" height="106"></td>
\r
+ <td><img src="iso.jpg" width="101" height="125"></td>
\r
</tr>
\r
<tr>
\r
<td>K</td>
\r
</tr>
\r
<tr>
\r
<td>K</td>
\r
@@
-124,7
+122,7
@@
td {
<td> </td>
\r
<td>AAA<br>
\r
AAG</td>
\r
<td> </td>
\r
<td>AAA<br>
\r
AAG</td>
\r
- <td><img src="lyschem.gif" width="102" height="152"></td>
\r
+ <td><img src="lys.jpg" width="79" height="167"></td>
\r
</tr>
\r
<tr>
\r
<td>L</td>
\r
</tr>
\r
<tr>
\r
<td>L</td>
\r
@@
-139,7
+137,7
@@
td {
CTC<br>
\r
CTA<br>
\r
CTG</td>
\r
CTC<br>
\r
CTA<br>
\r
CTG</td>
\r
- <td><img src="leuchem.gif" width="102" height="107"></td>
\r
+ <td><img src="leu.jpg" width="97" height="120"></td>
\r
</tr>
\r
<tr>
\r
<td>M</td>
\r
</tr>
\r
<tr>
\r
<td>M</td>
\r
@@
-148,7
+146,7
@@
td {
<td>hydrophobic<br>
\r
neutral </td>
\r
<td>ATG</td>
\r
<td>hydrophobic<br>
\r
neutral </td>
\r
<td>ATG</td>
\r
- <td><img src="metchem.gif" width="102" height="130"></td>
\r
+ <td><img src="met.jpg" width="86" height="151"></td>
\r
</tr>
\r
<tr>
\r
<td>N</td>
\r
</tr>
\r
<tr>
\r
<td>N</td>
\r
@@
-159,7
+157,7
@@
td {
neutral </td>
\r
<td>AAT<br>
\r
AAC</td>
\r
neutral </td>
\r
<td>AAT<br>
\r
AAC</td>
\r
- <td><img src="asnchem.gif" width="102" height="106"></td>
\r
+ <td><img src="asparagine.jpg" width="84" height="116"></td>
\r
</tr>
\r
<tr>
\r
<td>P</td>
\r
</tr>
\r
<tr>
\r
<td>P</td>
\r
@@
-171,7
+169,7
@@
td {
CCC<br>
\r
CCA<br>
\r
CCG</td>
\r
CCC<br>
\r
CCA<br>
\r
CCG</td>
\r
- <td><img src="prochem.gif" width="65" height="93"></td>
\r
+ <td><img src="pro.jpg" width="101" height="90"></td>
\r
</tr>
\r
<tr>
\r
<td>Q</td>
\r
</tr>
\r
<tr>
\r
<td>Q</td>
\r
@@
-182,7
+180,7
@@
td {
neutral</td>
\r
<td>CAA<br>
\r
CAG</td>
\r
neutral</td>
\r
<td>CAA<br>
\r
CAG</td>
\r
- <td><img src="gluchem.gif" width="102" height="127"></td>
\r
+ <td><img src="glutamine.jpg" width="81" height="137"></td>
\r
</tr>
\r
<tr>
\r
<td>R</td>
\r
</tr>
\r
<tr>
\r
<td>R</td>
\r
@@
-197,7
+195,7
@@
td {
CGG<br>
\r
AGA<br>
\r
AGG</td>
\r
CGG<br>
\r
AGA<br>
\r
AGG</td>
\r
- <td><img src="argchem.gif" width="102" height="175"></td>
\r
+ <td><img src="arg.jpg" width="95" height="187"></td>
\r
</tr>
\r
<tr>
\r
<td>S</td>
\r
</tr>
\r
<tr>
\r
<td>S</td>
\r
@@
-212,7
+210,7
@@
td {
TCG<br>
\r
AGT<br>
\r
AGC</td>
\r
TCG<br>
\r
AGT<br>
\r
AGC</td>
\r
- <td><img src="serchem.gif" width="102" height="81"></td>
\r
+ <td><img src="ser.jpg" width="96" height="74"></td>
\r
</tr>
\r
<tr>
\r
<td>T</td>
\r
</tr>
\r
<tr>
\r
<td>T</td>
\r
@@
-225,7
+223,7
@@
td {
ACC<br>
\r
ACA<br>
\r
ACG</td>
\r
ACC<br>
\r
ACA<br>
\r
ACG</td>
\r
- <td><img src="thrchem.gif" width="102" height="84"></td>
\r
+ <td><img src="thr.jpg" width="94" height="96"></td>
\r
</tr>
\r
<tr>
\r
<td>V</td>
\r
</tr>
\r
<tr>
\r
<td>V</td>
\r
@@
-238,7
+236,7
@@
td {
GTC<br>
\r
GTA<br>
\r
GTG</td>
\r
GTC<br>
\r
GTA<br>
\r
GTG</td>
\r
- <td><img src="valchem.gif" width="102" height="84"></td>
\r
+ <td><img src="val.jpg" width="99" height="98"></td>
\r
</tr>
\r
<tr>
\r
<td>W</td>
\r
</tr>
\r
<tr>
\r
<td>W</td>
\r
@@
-248,7
+246,7
@@
td {
hydrophobic<br>
\r
neutral</td>
\r
<td>TGG</td>
\r
hydrophobic<br>
\r
neutral</td>
\r
<td>TGG</td>
\r
- <td><img src="trpchem.gif" width="125" height="125"></td>
\r
+ <td><img src="tryp.jpg" width="106" height="173"></td>
\r
</tr>
\r
<tr>
\r
<td>X</td>
\r
</tr>
\r
<tr>
\r
<td>X</td>
\r
@@
-267,7
+265,7
@@
td {
hydrophobic </td>
\r
<td>TAT<br>
\r
TAC</td>
\r
hydrophobic </td>
\r
<td>TAT<br>
\r
TAC</td>
\r
- <td><img src="tyrchem.gif" width="102" height="149"></td>
\r
+ <td><img src="tyr.jpg" width="85" height="152"></td>
\r
</tr>
\r
<tr>
\r
<td>Z</td>
\r
</tr>
\r
<tr>
\r
<td>Z</td>
\r
@@
-275,7
+273,7
@@
td {
<td>either glutamic acid or glutamine</td>
\r
<td> </td>
\r
<td> </td>
\r
<td>either glutamic acid or glutamine</td>
\r
<td> </td>
\r
<td> </td>
\r
- <td><img src="glnchem.gif" width="102" height="130"></td>
\r
+ <td> </td>
\r
</tr>
\r
<tr>
\r
<td> </td>
\r
</tr>
\r
<tr>
\r
<td> </td>
\r
@@
-288,8
+286,6
@@
td {
<td> </td>
\r
</tr>
\r
</table>
\r
<td> </td>
\r
</tr>
\r
</table>
\r
- <h2><br>
\r
- </h2>
\r
</div>
\r
</body>
\r
</html>
\r
</div>
\r
</body>
\r
</html>
\r