+ <ul>
+ <li>
+ <!-- JAL-1767,JAL-2647 -->Principal Components Analysis and
+ Viewer state is saved in Jalview Project<br />The 'Change
+ parameters' option has also been removed from the PCA
+ viewer.
+ </li>
+ <li>
+ <!-- JAL-3198 -->More efficient creation of selections and
+ multiple groups when working with large alignments
+ </li>
+ <li>
+ <!-- JAL-3200 -->Speedier import of annotation rows when
+ parsing stockholm files
+ </li>
+ <li>
+ <!-- JAL-3018 -->Update of Ensembl Rest Client to API v9.0
+ </li>
+ <li>
+ <!-- JAL-3... -->Sequence features can be filtered and
+ shaded according to any associated attributes (e.g. variant
+ attributes from VCF file, or key-value pairs imported from
+ column 9 of GFF file)
+ </li>
+ <li>
+ <!-- JAL-3139, -->More efficient sequence feature render
+ algorithm (Z-sort/transparency and filter aware)
+ </li>
+ <li>
+ <!-- JAL-2527 -->Alignment Overview now by default shows
+ only visible region of alignment (this can be changed in
+ user preferences)
+ </li>
+ <li><!-- -->
+ </li>
+ </ul>
+ <em>Deprecations</em>
+ <ul>
+ <li>
+ <!-- JAL-3035 -->DAS sequence retrieval and annotation
+ capabilities removed from the Jalview Desktop
+ </li>
+ </ul>
+ <em>Release Processes</em>
+ <ul>
+ <li>Atlassian Bamboo continuous integration server for
+ unattended Test Suite execution</li>
+ <li>
+ <!-- JAL-2864 -->Memory test suite to detect leaks in common
+ operations
+ </li>
+ <li>
+ <!-- JAL-3140 -->IntervalStoreJ (new updatable NCList
+ implementation) used for Sequence Feature collections
+ </li>
+ <li>
+ <!-- JAL-3063 -->Castor library for XML marshalling and
+ unmarshalling has been replaced by JAXB for Jalview projects
+ and XML based data retrieval clients
+ </li>
+ <li>
+ <!-- JAL -->
+
+ </ul>
+ </div></td>
+ <td><div align="left">