+ <tr>\r
+ <td><div align="center"><strong>2.3</strong><br>\r
+ 8/5/07</div></td>\r
+ <td><ul>\r
+ <li>Jmol 11 integration</li>\r
+ <li>PDB views stored in Jalview XML files</li>\r
+ <li>Slide sequences</li>\r
+ <li>Edit sequence in place</li>\r
+ <li>EMBL CDS features</li>\r
+ <li>DAS Feature mapping</li>\r
+ <li>Feature ordering</li>\r
+ <li>Alignment Properties</li>\r
+ <li>Annotation Scores</li>\r
+ <li>Sort by scores</li>\r
+ <li>Feature/annotation editing in applet</li>\r
+</ul></td><td>\r
+ <ul>\r
+ <li>Headless state operation in 2.2.1</li>\r
+ <li>Incorrect and unstable DNA pairwise alignment</li>\r
+ <li>Cut and paste of sequences with annotation</li>\r
+ <li>Feature group display state in XML</li>\r
+ <li>Feature ordering in XML</li>\r
+ <li>blc file iteration selection using filename # suffix</li>\r
+ <li>Stockholm alignment properties</li>\r
+ <li>Stockhom alignment secondary structure annotation</li>\r
+ <li>2.2.1 applet had no feature transparency</li>\r
+ <li>Number pad keys can be used in cursor mode</li>\r
+ </ul>\r
+ </td>\r
+\r
+ </tr>\r
+ <tr> \r
+ <td><div align="center"><strong>2.2.1</strong><br>\r
+ 12/2/07</div></td>\r
+ <td><ul>\r
+ <li>Non standard characters can be read and displayed\r
+ <li>Annotations/Features can be imported/exported to the applet via textbox\r
+ <li>Applet allows editing of sequence/annotation/group name & description\r
+ <li>Preference setting to display sequence name in italics\r
+ <li>Annotation file format extended to allow Sequence_groups\r
+ to be defined\r
+ <li>Default opening of alignment overview panel can be specified in\r
+ preferences\r
+ <li>PDB residue numbering annotation added to associated sequences\r
+ </ul></td>\r
+ <td> <ul>\r
+ <li>Applet crash under certain Linux OS with Java 1.6 installed\r
+ <li>Annotation file export / import bugs fixed\r
+ <li>PNG / EPS image output bugs fixed</ul></td>\r
+ </tr>\r
+ <tr> \r
+ <td><div align="center"><strong>2.2</strong><br>\r
+ 27/11/06</div></td>\r
+ <td><ul>\r
+ <li>Multiple views on alignment \r
+ <li>Sequence feature editing \r
+ <li>"Reload" alignment \r
+ <li>"Save" to current filename \r
+ <li>Background dependent text colour \r
+ <li>Right align sequence ids \r
+ <li>User-defined lower case residue colours \r
+ <li>Format Menu \r
+ <li>Select Menu \r
+ <li>Menu item accelerator keys \r
+ <li>Control-V pastes to current alignment \r
+ <li>Cancel button for DAS Feature Fetching \r
+ <li>PCA and PDB Viewers zoom via mouse roller \r
+ <li>User-defined sub-tree colours and sub-tree selection \r
+ <li>'New Window' button on the 'Output to Text box' </ul></td>\r
+ <td> <ul>\r
+ <li>New memory efficient Undo/Redo System \r
+ <li>Optimised symbol lookups and conservation/consensus calculations \r
+ <li>Region Conservation/Consensus recalculated after edits \r
+ <li>Fixed Remove Empty Columns Bug (empty columns at end of alignment) \r
+ <li>Slowed DAS Feature Fetching for increased robustness. \r
+ <li>Made angle brackets in ASCII feature descriptions display correctly \r
+ <li>Re-instated Zoom function for PCA \r
+ <li>Sequence descriptions conserved in web service analysis results \r
+ <li>Uniprot ID discoverer uses any word separated by ∣ \r
+ <li>WsDbFetch query/result association resolved \r
+ <li>Tree leaf to sequence mapping improved \r
+ <li>Smooth fonts switch moved to FontChooser dialog box. </ul></td>\r
+ </tr>\r