-<p><strong>Jalview Version 2.2</strong></p>
-<p>Multiple views with different styles, colours, hidden regions for
-one alignment</p>
-<p>Easily add, amend and delete sequence features</p>
-<p>"Reload" alignment from File or URL to revert to
-original</p>
-<p>"Save" to current filename or "Save As" to
-new filename</p>
-<p>New <strong>"New Window"</strong> button on the
-"Output To Textbox" opens output window for quick 'sequence
-editing'.</p>
-<p>Set different text colour for dark or light background</p>
-<p>Right align sequence ids</p>
-<p>Set colour of lower case residues in a user defined colour scheme
-</p>
-<p>Menu Rearrangements: New <strong>Format</strong> for alignment
-layout and <strong>Select</strong> for region selection.</p>
-</p>
-<p>Menu item accelerator keys added</p>
-<p>Control-V pastes sequences to active window, Control-Shift-V
-pastes to a new window.</p>
-<p>Raise/Minimise alignment and all associated windows from desktop
-window's <strong>window</strong> menu</p>
-<p>Select and colour whole branches of a tree</p>
-<p>'New Window' button on the 'Output to Text box' alignment output
-option to open a new alignment window after editing.</p>
-<p><strong>Issues Resolved</strong></p>
-</p>
-<p>Optimisations for large alignments: faster multithreaded
-calculations and Undo/Redo system.</p>
-<p>Remove empty columns - if empty columns exist at the end of the
-alignment bug fixed.</p>
-<p>DAS feature fetching slowed down, doesn't overload DAS servers</p>
-<p>DAS feature fetching can be cancelled</p>
-<p>Correct display of > and < symbols for feature descriptions
-without explicit <html> tags.</p>
-<p>Zoom working in PCA viewer</p>
-<p>Sequence Descriptions retained after running a web service</p>
-<p> </p>
-<p>See the <a href="releases.html">Release History</a> page for
-details of all new features and resolved issues.</p>
+ <p>
+ <strong>Issues Resolved (a select list - see the <a
+ href="releases.html#Jalview2.7">release history</a> for full details)
+ </strong>
+ </p>
+ <p>
+ <strong>Issues in the Jalview Desktop</strong>
+ <ul>
+ <li>Problems viewing associated structures for sequences
+ retrieved from UNIPROT</li>
+ <li>Problems viewing Jalview projects from older versions in
+ version 2.6</li>
+ <li>Preservation of hidden annotation rows and tree bootstrap
+ values in projects</li>
+ <li>Newly added JABAWS servers not always visible in web services
+ menu</li>
+ </ul>
+ <strong>Issues specific to the JalviewLite Applet</strong>
+ <ul>
+ <li>Layout problems when lots of annotation rows are displayed</li>
+ <li><= shown as = in annotation row tooltip</li>
+ <li>export features raises exception when no features exist</li>
+ <li>relative URLs not handled properly when used in parameters
+ and annotation files</li>
+ </ul>
+ <strong>Issues affecting both applet and application</strong>
+ <ul>
+ <li>sequence numbering not preserved in MSF alignment output</li>
+ <li>sequence associated secondary structure not correctly parsed
+ in interleaved stockholm</li>
+ <li>sequences containing lowercase letters are not properly
+ associated with their pdb files</li>
+ <li>Jalview PDB file reader does not extract sequence from deoxy
+ nucleotide chains correctly</li>
+ <li>Sequence length given in alignment properties window is off
+ by 1</li>
+ </ul>