- <xs:simpleContent><xs:extension base="xs:string">
- <xs:attribute name="id" type="xs:string"/>
- <xs:attribute name="type" type="xs:string" use="required"/>
- <xs:attribute name="rows" type="xs:integer" use="required"/>
- <xs:attribute name="cols" type="xs:integer" use="required"/>
- </xs:extension>
- </xs:simpleContent>
+ <xs:sequence>
+ <xs:element name="elements" type="xs:string" minOccurs="1"
+ maxOccurs="1">
+ <xs:annotation>
+ <xs:documentation>serialised representation of matrix as one or
+ more sets of comma separated values</xs:documentation>
+ </xs:annotation>
+ </xs:element>
+ <xs:element name="groups" type="xs:string" minOccurs="0"
+ maxOccurs="unbounded">
+ <xs:annotation>
+ <xs:documentation>Comma separated series of BigIntegers formed from
+ bitsets defining partitions on the rows/columns of the matrix
+ </xs:documentation>
+ </xs:annotation>
+ </xs:element>
+ <xs:element name="newick" type="xs:string" minOccurs="0"
+ maxOccurs="unbounded">
+ <xs:annotation>
+ <xs:documentation>tree computed for this</xs:documentation>
+ </xs:annotation>
+ </xs:element>
+ <xs:element name="property" type="vamsas:property"
+ minOccurs="0" maxOccurs="unbounded" />
+ </xs:sequence>
+
+ <xs:attribute name="type" type="xs:string" use="required" />
+ <xs:attribute name="rows" type="xs:integer"
+ use="required" />
+ <xs:attribute name="cols" type="xs:integer"
+ use="required" />
+ <xs:attribute name="treeMethod" type="xs:string"
+ use="optional" />
+ <xs:attribute name="cutHeight" type="xs:double"
+ use="optional" />
+ <xs:attribute name="id" type="xs:string" use="optional" />
+