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Merge branch 'develop' into features/filetypeEnum
[jalview.git]
/
src
/
MCview
/
PDBfile.java
diff --git
a/src/MCview/PDBfile.java
b/src/MCview/PDBfile.java
index
6da867d
..
060de45
100755
(executable)
--- a/
src/MCview/PDBfile.java
+++ b/
src/MCview/PDBfile.java
@@
-23,10
+23,9
@@
package MCview;
import jalview.datamodel.AlignmentAnnotation;
import jalview.datamodel.DBRefSource;
import jalview.datamodel.SequenceI;
import jalview.datamodel.AlignmentAnnotation;
import jalview.datamodel.DBRefSource;
import jalview.datamodel.SequenceI;
-import jalview.io.FileParse;
import jalview.io.DataSourceType;
import jalview.io.DataSourceType;
+import jalview.io.FileParse;
import jalview.io.StructureFile;
import jalview.io.StructureFile;
-import jalview.structure.StructureImportSettings;
import jalview.util.MessageManager;
import java.io.IOException;
import jalview.util.MessageManager;
import java.io.IOException;
@@
-67,7
+66,7
@@
public class PDBfile extends StructureFile
}
@Override
}
@Override
- public String print()
+ public String print(SequenceI[] seqs, boolean jvSuffix)
{
return null;
}
{
return null;
}
@@
-134,8
+133,7
@@
public class PDBfile extends StructureFile
break;
}
if (line.indexOf("ATOM") == 0
break;
}
if (line.indexOf("ATOM") == 0
- || (StructureImportSettings.isProcessHETATMs()
- && line.indexOf("HETATM") == 0 && !terFlag))
+ || (line.indexOf("HETATM") == 0 && !terFlag))
{
terFlag = false;
{
terFlag = false;