- //System.out.println("Seq2 " + rt.freeMemory() + " " + rt.totalMemory());
- // long tstart = System.currentTimeMillis();
- // calcScoreMatrix();
- //long tend = System.currentTimeMillis();
- //System.out.println("Time take to calculate score matrix = " + (tend-tstart) + " ms");
- // printScoreMatrix(score);
- //System.out.println();
- //printScoreMatrix(traceback);
- //System.out.println();
- // printScoreMatrix(E);
- //System.out.println();
- ///printScoreMatrix(F);
- //System.out.println();
+ // System.out.println("Seq2 " + rt.freeMemory() + " " + rt.totalMemory());
+ // long tstart = System.currentTimeMillis();
+ // calcScoreMatrix();
+ // long tend = System.currentTimeMillis();
+ // System.out.println("Time take to calculate score matrix = " +
+ // (tend-tstart) + " ms");
+ // printScoreMatrix(score);
+ // System.out.println();
+ // printScoreMatrix(traceback);
+ // System.out.println();
+ // printScoreMatrix(E);
+ // System.out.println();
+ // /printScoreMatrix(F);
+ // System.out.println();