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Sends gapChar to seqData
[jalview.git]
/
src
/
jalview
/
analysis
/
NJTree.java
diff --git
a/src/jalview/analysis/NJTree.java
b/src/jalview/analysis/NJTree.java
index
98916e3
..
974175f
100755
(executable)
--- a/
src/jalview/analysis/NJTree.java
+++ b/
src/jalview/analysis/NJTree.java
@@
-1018,13
+1018,13
@@
public class NJTree
*
\r
* @return null or cut'n'pasteable alignment
\r
*/
\r
*
\r
* @return null or cut'n'pasteable alignment
\r
*/
\r
- public String printOriginalSequenceData()
\r
+ public String printOriginalSequenceData(char gapChar)
\r
{
\r
if (seqData==null)
\r
return null;
\r
{
\r
if (seqData==null)
\r
return null;
\r
-// return seqData.getSequenceString(Comparison.GapChars[0]);
\r
+
\r
StringBuffer sb = new StringBuffer();
\r
StringBuffer sb = new StringBuffer();
\r
- String[] seqdatas = seqData.getSequenceStrings(Comparison.GapChars.charAt(0));
\r
+ String[] seqdatas = seqData.getSequenceStrings(gapChar);
\r
for(int i=0; i<seqdatas.length; i++)
\r
{
\r
sb.append(new jalview.util.Format("%-" + 15 + "s").form(
\r
for(int i=0; i<seqdatas.length; i++)
\r
{
\r
sb.append(new jalview.util.Format("%-" + 15 + "s").form(
\r