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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git]
/
src
/
jalview
/
analysis
/
NJTree.java
diff --git
a/src/jalview/analysis/NJTree.java
b/src/jalview/analysis/NJTree.java
index
522c2b1
..
9a39ac0
100644
(file)
--- a/
src/jalview/analysis/NJTree.java
+++ b/
src/jalview/analysis/NJTree.java
@@
-22,7
+22,7
@@
package jalview.analysis;
import jalview.api.analysis.ScoreModelI;
import jalview.api.analysis.SimilarityParamsI;
import jalview.api.analysis.ScoreModelI;
import jalview.api.analysis.SimilarityParamsI;
-import jalview.datamodel.SequenceNode;
+import jalview.datamodel.BinaryNode;
import jalview.viewmodel.AlignmentViewport;
/**
import jalview.viewmodel.AlignmentViewport;
/**
@@
-81,7
+81,7
@@
public class NJTree extends TreeBuilder
* {@inheritDoc}
*/
@Override
* {@inheritDoc}
*/
@Override
- protected void findNewDistances(SequenceNode nodei, SequenceNode nodej,
+ protected void findNewDistances(BinaryNode nodei, BinaryNode nodej,
double dist)
{
nodei.dist = ((dist + ri) - rj) / 2;
double dist)
{
nodei.dist = ((dist + ri) - rj) / 2;