+ * Function to get the end position corresponding to a given start position
+ *
+ * @param indice
+ * - start position of a base pair
+ * @return - end position of a base pair
+ */
+ /*
+ * makes no sense at the moment :( public int findEnd(int indice){ //TODO:
+ * Probably extend this to find the start to a given end? //could be done by
+ * putting everything twice to the hash ArrayList<Integer> pair = new
+ * ArrayList<Integer>(); return pairHash.get(indice); }
+ */
+
+ /**