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JAL-4290 new CommandsTest.headlessOrGuiImageOutputTest - uses CommandLineOperations...
[jalview.git]
/
src
/
jalview
/
analysis
/
SecStrConsensus.java
diff --git
a/src/jalview/analysis/SecStrConsensus.java
b/src/jalview/analysis/SecStrConsensus.java
index
bf75811
..
05c20a0
100644
(file)
--- a/
src/jalview/analysis/SecStrConsensus.java
+++ b/
src/jalview/analysis/SecStrConsensus.java
@@
-1,6
+1,6
@@
/*
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*
* This file is part of Jalview.
*
@@
-179,8
+179,8
@@
public class SecStrConsensus
{
fact2 = tab[k + 1][j];
}
{
fact2 = tab[k + 1][j];
}
- tab[i][j] = Math.max(tab[i][j], basePairScore(seq, i, k)
- + fact1 + fact2);
+ tab[i][j] = Math.max(tab[i][j],
+ basePairScore(seq, i, k) + fact1 + fact2);
}
}
}
}
}
}