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hide idwidthadjuster if wrapped
[jalview.git]
/
src
/
jalview
/
analysis
/
SequenceFeatureFetcher.java
diff --git
a/src/jalview/analysis/SequenceFeatureFetcher.java
b/src/jalview/analysis/SequenceFeatureFetcher.java
index
6560504
..
667a2dd
100755
(executable)
--- a/
src/jalview/analysis/SequenceFeatureFetcher.java
+++ b/
src/jalview/analysis/SequenceFeatureFetcher.java
@@
-114,7
+114,8
@@
public class SequenceFeatureFetcher implements Runnable
\r
if(unknownSequences.size()>0)
\r
{
\r
\r
if(unknownSequences.size()>0)
\r
{
\r
- WSWUBlastClient blastClient = new WSWUBlastClient(align, unknownSequences);
\r
+ //ignore for now!!!!!!!!!!
\r
+ // WSWUBlastClient blastClient = new WSWUBlastClient(align, unknownSequences);
\r
}
\r
\r
}
\r
}
\r
\r
}
\r
@@
-202,16
+203,12
@@
void ReadUniprotFile(String [] result, RandomAccessFile out, AlignmentI align)
if(out!=null)
\r
try{ out.writeBytes("</feature>\n"); }catch(Exception ex){}
\r
\r
if(out!=null)
\r
try{ out.writeBytes("</feature>\n"); }catch(Exception ex){}
\r
\r
-
\r
- if(sstart>=sequence.getStart() && eend<=sequence.getEnd())
\r
- {
\r
SequenceFeature sf = new SequenceFeature(type,
\r
sstart,
\r
eend,
\r
description,
\r
status);
\r
features.add(sf);
\r
SequenceFeature sf = new SequenceFeature(type,
\r
sstart,
\r
eend,
\r
description,
\r
status);
\r
features.add(sf);
\r
- }
\r
}
\r
\r
if(result[r].indexOf("<sequence")>-1)
\r
}
\r
\r
if(result[r].indexOf("<sequence")>-1)
\r