+ if(sbuffer.length()>0)\r
+ {\r
+ output.formatForOutput();\r
+ outputFrame.setContentPane(output);\r
+ output.setText("Your sequences have been matched to Uniprot. Some of the ids have been\n"\r
+ +"altered, most likely the start/end residue will have been updated.\n"\r
+ +"Save your alignment to maintain the updated id.\n\n"+sbuffer.toString());\r
+ Desktop.addInternalFrame(outputFrame, "Sequence names updated ", 600,300);\r
+\r
+ }\r