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JAL-2416 parse score matrices in either NCBI or AAindex format
[jalview.git]
/
src
/
jalview
/
analysis
/
scoremodels
/
FeatureDistanceModel.java
diff --git
a/src/jalview/analysis/scoremodels/FeatureDistanceModel.java
b/src/jalview/analysis/scoremodels/FeatureDistanceModel.java
index
b44b4cf
..
5bf4b11
100644
(file)
--- a/
src/jalview/analysis/scoremodels/FeatureDistanceModel.java
+++ b/
src/jalview/analysis/scoremodels/FeatureDistanceModel.java
@@
-41,8
+41,19
@@
import java.util.Set;
public class FeatureDistanceModel implements DistanceScoreModelI,
ViewBasedAnalysisI
{
public class FeatureDistanceModel implements DistanceScoreModelI,
ViewBasedAnalysisI
{
+ private static final String NAME = "Sequence Feature Similarity";
+
+ private String description;
+
FeatureRenderer fr;
FeatureRenderer fr;
+ /**
+ * Constructor
+ */
+ public FeatureDistanceModel()
+ {
+ }
+
@Override
public boolean configureFromAlignmentView(AlignmentViewPanel view)
@Override
public boolean configureFromAlignmentView(AlignmentViewPanel view)
@@
-183,7
+194,13
@@
public class FeatureDistanceModel implements DistanceScoreModelI,
@Override
public String getName()
{
@Override
public String getName()
{
- return "Sequence Feature Similarity";
+ return NAME;
+ }
+
+ @Override
+ public String getDescription()
+ {
+ return description;
}
@Override
}
@Override