- // Change GAP_SPACE to GAP_DASH if we adopt - for gap in matrices
- char c1 = i >= len1 ? Comparison.GAP_SPACE : seq1.charAt(i);
- char c2 = i >= len2 ? Comparison.GAP_SPACE : seq2.charAt(i);
+
+ char c1 = i >= len1 ? GAP_CHARACTER : seq1.charAt(i);
+ char c2 = i >= len2 ? GAP_CHARACTER : seq2.charAt(i);