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JAL-2526 correct boundary conditions for sequence left/right of cursor
[jalview.git]
/
src
/
jalview
/
analysis
/
scoremodels
/
ScoreMatrix.java
diff --git
a/src/jalview/analysis/scoremodels/ScoreMatrix.java
b/src/jalview/analysis/scoremodels/ScoreMatrix.java
index
9bec6e4
..
efaeb43
100644
(file)
--- a/
src/jalview/analysis/scoremodels/ScoreMatrix.java
+++ b/
src/jalview/analysis/scoremodels/ScoreMatrix.java
@@
-20,7
+20,9
@@
*/
package jalview.analysis.scoremodels;
*/
package jalview.analysis.scoremodels;
+import jalview.api.AlignmentViewPanel;
import jalview.api.analysis.PairwiseScoreModelI;
import jalview.api.analysis.PairwiseScoreModelI;
+import jalview.api.analysis.ScoreModelI;
import jalview.api.analysis.SimilarityParamsI;
import jalview.datamodel.AlignmentView;
import jalview.math.Matrix;
import jalview.api.analysis.SimilarityParamsI;
import jalview.datamodel.AlignmentView;
import jalview.math.Matrix;
@@
-31,7
+33,8
@@
import java.util.Arrays;
/**
* A class that models a substitution score matrix for any given alphabet of
/**
* A class that models a substitution score matrix for any given alphabet of
- * symbols. Instances of this class are immutable and thread-safe.
+ * symbols. Instances of this class are immutable and thread-safe, so the same
+ * object is returned from calls to getInstance().
*/
public class ScoreMatrix extends SimilarityScoreModel implements
PairwiseScoreModelI
*/
public class ScoreMatrix extends SimilarityScoreModel implements
PairwiseScoreModelI
@@
-582,4
+585,10
@@
public class ScoreMatrix extends SimilarityScoreModel implements
{
return maxValue;
}
{
return maxValue;
}
+
+ @Override
+ public ScoreModelI getInstance(AlignmentViewPanel avp)
+ {
+ return this;
+ }
}
}