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Merge branch 'develop' into spike/JAL-4047/JAL-4048_columns_in_sequenceID
[jalview.git]
/
src
/
jalview
/
api
/
AlignViewControllerI.java
diff --git
a/src/jalview/api/AlignViewControllerI.java
b/src/jalview/api/AlignViewControllerI.java
index
a7ec69e
..
3e689d1
100644
(file)
--- a/
src/jalview/api/AlignViewControllerI.java
+++ b/
src/jalview/api/AlignViewControllerI.java
@@
-20,10
+20,10
@@
*/
package jalview.api;
*/
package jalview.api;
-import jalview.io.DataSourceType;
-
import java.util.List;
import java.util.List;
+import jalview.io.DataSourceType;
+
/**
* prototype abstract controller for a Jalview alignment view
*
/**
* prototype abstract controller for a Jalview alignment view
*
@@
-96,7
+96,7
@@
public interface AlignViewControllerI
* @return true if parsing resulted in something being imported to the view or
* dataset
*/
* @return true if parsing resulted in something being imported to the view or
* dataset
*/
- public boolean parseFeaturesFile(String file, DataSourceType sourceType,
+ public boolean parseFeaturesFile(Object file, DataSourceType sourceType,
boolean relaxedIdMatching);
/**
boolean relaxedIdMatching);
/**
@@
-111,4
+111,12
@@
public interface AlignViewControllerI
boolean markHighlightedColumns(boolean invert, boolean extendCurrent,
boolean toggle);
boolean markHighlightedColumns(boolean invert, boolean extendCurrent,
boolean toggle);
+ /**
+ * copies each distinct highlighted region on the current view as a new
+ * sequence on the clipboard
+ *
+ * @return
+ */
+ boolean copyHighlightedRegionsToClipboard();
+
}
}