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JAL-3633 Help documentation updated
[jalview.git]
/
src
/
jalview
/
api
/
ComplexAlignFile.java
diff --git
a/src/jalview/api/ComplexAlignFile.java
b/src/jalview/api/ComplexAlignFile.java
index
4ac08cf
..
1b579ad
100644
(file)
--- a/
src/jalview/api/ComplexAlignFile.java
+++ b/
src/jalview/api/ComplexAlignFile.java
@@
-20,9
+20,8
@@
*/
package jalview.api;
*/
package jalview.api;
-import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.HiddenColumns;
import jalview.datamodel.SequenceI;
import jalview.datamodel.SequenceI;
-import jalview.schemes.ColourSchemeI;
/**
* This interface should be implemented by complex file parser with the ability
/**
* This interface should be implemented by complex file parser with the ability
@@
-44,14
+43,14
@@
public interface ComplexAlignFile
*
* @return
*/
*
* @return
*/
- public ColourSchemeI getColourScheme();
+ public String getGlobalColourScheme();
/**
* Retrieves the Column selection/hidden column from a complex file parser
*
* @return
*/
/**
* Retrieves the Column selection/hidden column from a complex file parser
*
* @return
*/
- public ColumnSelection getColumnSelection();
+ public HiddenColumns getHiddenColumns();
/**
* Retrieves hidden sequences from a complex file parser
/**
* Retrieves hidden sequences from a complex file parser