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JAL-1479 added support for SIFTs mapping output viewing and implemented exception...
[jalview.git]
/
src
/
jalview
/
api
/
DBRefEntryI.java
diff --git
a/src/jalview/api/DBRefEntryI.java
b/src/jalview/api/DBRefEntryI.java
index
3238781
..
b927fa5
100644
(file)
--- a/
src/jalview/api/DBRefEntryI.java
+++ b/
src/jalview/api/DBRefEntryI.java
@@
-5,23
+5,68
@@
public interface DBRefEntryI
{
public boolean equalRef(DBRefEntryI entry);
{
public boolean equalRef(DBRefEntryI entry);
+ /**
+ *
+ * @return Source DB name for this entry
+ */
public String getSource();
public String getSource();
- public String getVersion();
-
+ /**
+ *
+ * @return Accession Id for this entry
+ */
public String getAccessionId();
public String getAccessionId();
+ /**
+ *
+ * @param accessionId
+ * Accession Id for this entry
+ */
public void setAccessionId(String accessionId);
public void setAccessionId(String accessionId);
+ /**
+ *
+ * @param source
+ * Source DB name for this entry
+ */
public void setSource(String source);
public void setSource(String source);
+ /**
+ *
+ * @return Source DB version for this entry
+ */
+ public String getVersion();
+
+ /**
+ *
+ * @param version
+ * Source DB version for this entry
+ */
public void setVersion(String version);
public void setVersion(String version);
+ /**
+ *
+ * @param startRes
+ * index of start residue in the source DB
+ */
public void setStartRes(int startRes);
public void setStartRes(int startRes);
+ /**
+ *
+ * @return index of start residue in the source DB
+ */
public int getStartRes();
public int getStartRes();
+ /**
+ *
+ * @param endRes
+ * index of end residue in the source DB
+ */
public void setEndRes(int endRes);
public void setEndRes(int endRes);
+ /**
+ *
+ * @return index of end residue in the source DB
+ */
public int getEndRes();
}
public int getEndRes();
}