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JAL-3368 'web' colour parsing reinstated (for now)
[jalview.git]
/
src
/
jalview
/
api
/
SiftsClientI.java
diff --git
a/src/jalview/api/SiftsClientI.java
b/src/jalview/api/SiftsClientI.java
index
dad434a
..
367a0de
100644
(file)
--- a/
src/jalview/api/SiftsClientI.java
+++ b/
src/jalview/api/SiftsClientI.java
@@
-47,7
+47,6
@@
public interface SiftsClientI
*/
public String getDbCoordSys();
*/
public String getDbCoordSys();
-
/**
* Get DB Source for the SIFTs Entry
*
/**
* Get DB Source for the SIFTs Entry
*
@@
-101,7
+100,7
@@
public interface SiftsClientI
* @return Sequence<->Structure mapping as int[][]
* @throws SiftsException
*/
* @return Sequence<->Structure mapping as int[][]
* @throws SiftsException
*/
- public StringBuffer getMappingOutput(MappingOutputPojo mop)
+ public StringBuilder getMappingOutput(MappingOutputPojo mop)
throws SiftsException;
/**
throws SiftsException;
/**
@@
-117,7
+116,7
@@
public interface SiftsClientI
*/
public StructureMapping getSiftsStructureMapping(SequenceI seq,
String pdbFile, String chain) throws SiftsException;
*/
public StructureMapping getSiftsStructureMapping(SequenceI seq,
String pdbFile, String chain) throws SiftsException;
-
+
/**
* Get residue by residue mapping for a given Sequence and SIFTs entity
*
/**
* Get residue by residue mapping for a given Sequence and SIFTs entity
*
@@
-129,6
+128,5
@@
public interface SiftsClientI
* @throws Exception
*/
public HashMap<Integer, int[]> getGreedyMapping(String entityId,
* @throws Exception
*/
public HashMap<Integer, int[]> getGreedyMapping(String entityId,
- SequenceI seq,
- java.io.PrintStream os) throws SiftsException;
+ SequenceI seq, java.io.PrintStream os) throws SiftsException;
}
\ No newline at end of file
}
\ No newline at end of file