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Merge branch 'JAL-1755_npe_groupconsensus' into develop
[jalview.git]
/
src
/
jalview
/
appletgui
/
AppletJmol.java
diff --git
a/src/jalview/appletgui/AppletJmol.java
b/src/jalview/appletgui/AppletJmol.java
index
0db3e30
..
32465c1
100644
(file)
--- a/
src/jalview/appletgui/AppletJmol.java
+++ b/
src/jalview/appletgui/AppletJmol.java
@@
-1,6
+1,6
@@
/*
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*
* This file is part of Jalview.
*
@@
-552,7
+552,7
@@
public class AppletJmol extends EmbmenuFrame implements
else if (evt.getSource() == seqColour)
{
setEnabled(seqColour);
else if (evt.getSource() == seqColour)
{
setEnabled(seqColour);
- jmb.colourBySequence(ap.av.getShowSequenceFeatures(), ap);
+ jmb.colourBySequence(ap.av.isShowSequenceFeatures(), ap);
}
else if (!allChainsSelected)
{
}
else if (!allChainsSelected)
{
@@
-582,7
+582,7
@@
public class AppletJmol extends EmbmenuFrame implements
public void updateColours(Object source)
{
AlignmentPanel ap = (AlignmentPanel) source;
public void updateColours(Object source)
{
AlignmentPanel ap = (AlignmentPanel) source;
- jmb.colourBySequence(ap.av.getShowSequenceFeatures(), ap);
+ jmb.colourBySequence(ap.av.isShowSequenceFeatures(), ap);
}
public void updateTitleAndMenus()
}
public void updateTitleAndMenus()
@@
-593,7
+593,7
@@
public class AppletJmol extends EmbmenuFrame implements
return;
}
setChainMenuItems(jmb.chainNames);
return;
}
setChainMenuItems(jmb.chainNames);
- jmb.colourBySequence(ap.av.getShowSequenceFeatures(), ap);
+ jmb.colourBySequence(ap.av.isShowSequenceFeatures(), ap);
setTitle(jmb.getViewerTitle());
}
setTitle(jmb.getViewerTitle());
}