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JAL-629 example files from nf-core
[jalview.git]
/
src
/
jalview
/
appletgui
/
AppletJmolBinding.java
diff --git
a/src/jalview/appletgui/AppletJmolBinding.java
b/src/jalview/appletgui/AppletJmolBinding.java
index
f3b034e
..
c7ce994
100644
(file)
--- a/
src/jalview/appletgui/AppletJmolBinding.java
+++ b/
src/jalview/appletgui/AppletJmolBinding.java
@@
-24,7
+24,6
@@
import jalview.api.AlignmentViewPanel;
import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.ext.jmol.JalviewJmolBinding;
import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.ext.jmol.JalviewJmolBinding;
-import jalview.gui.IProgressIndicator;
import jalview.io.DataSourceType;
import jalview.structure.StructureSelectionManager;
import jalview.io.DataSourceType;
import jalview.structure.StructureSelectionManager;
@@
-52,13
+51,6
@@
class AppletJmolBinding extends JalviewJmolBinding
}
@Override
}
@Override
- public jalview.api.FeatureRenderer getFeatureRenderer(
- AlignmentViewPanel alignment)
- {
- return appletJmolBinding.ap.getFeatureRenderer();
- }
-
- @Override
public jalview.api.SequenceRenderer getSequenceRenderer(
AlignmentViewPanel alignment)
{
public jalview.api.SequenceRenderer getSequenceRenderer(
AlignmentViewPanel alignment)
{
@@
-155,7
+147,7
@@
class AppletJmolBinding extends JalviewJmolBinding
Container consolePanel, String buttonsToShow)
{
JmolAppConsoleInterface appc = new AppletConsole();
Container consolePanel, String buttonsToShow)
{
JmolAppConsoleInterface appc = new AppletConsole();
- appc.start(viewer);
+ appc.start(jmolViewer);
return appc;
}
return appc;
}
@@
-174,21
+166,12
@@
class AppletJmolBinding extends JalviewJmolBinding
@Override
public int[] resizeInnerPanel(String data)
{
@Override
public int[] resizeInnerPanel(String data)
{
- // TODO Auto-generated method stub
return null;
}
@Override
public Map<String, Object> getJSpecViewProperty(String arg0)
{
return null;
}
@Override
public Map<String, Object> getJSpecViewProperty(String arg0)
{
- // TODO Auto-generated method stub
- return null;
- }
-
- @Override
- protected IProgressIndicator getIProgressIndicator()
- {
- // no progress indicators on the applet
return null;
}
}
return null;
}
}