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JAL-1031 JAL-1032 if selection is non-null but empty, then calculate PCA or tree...
[jalview.git]
/
src
/
jalview
/
appletgui
/
PCAPanel.java
diff --git
a/src/jalview/appletgui/PCAPanel.java
b/src/jalview/appletgui/PCAPanel.java
index
44711d7
..
ff8b506
100755
(executable)
--- a/
src/jalview/appletgui/PCAPanel.java
+++ b/
src/jalview/appletgui/PCAPanel.java
@@
-55,11
+55,12
@@
public class PCAPanel extends EmbmenuFrame implements Runnable,
}
this.av = av;
}
this.av = av;
+ boolean selected=av.getSelectionGroup()!=null && av.getSelectionGroup().getSize()>0;
AlignmentView seqstrings = av
AlignmentView seqstrings = av
- .getAlignmentView(av.getSelectionGroup() != null);
+ .getAlignmentView(selected);
boolean nucleotide = av.getAlignment().isNucleotide();
SequenceI[] seqs;
boolean nucleotide = av.getAlignment().isNucleotide();
SequenceI[] seqs;
- if (av.getSelectionGroup() == null)
+ if (!selected)
{
seqs = av.getAlignment().getSequencesArray();
}
{
seqs = av.getAlignment().getSequencesArray();
}