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Must be 1.1 compliant
[jalview.git]
/
src
/
jalview
/
appletgui
/
SeqCanvas.java
diff --git
a/src/jalview/appletgui/SeqCanvas.java
b/src/jalview/appletgui/SeqCanvas.java
index
02c9990
..
0df4322
100755
(executable)
--- a/
src/jalview/appletgui/SeqCanvas.java
+++ b/
src/jalview/appletgui/SeqCanvas.java
@@
-519,12
+519,12
@@
public class SeqCanvas
}
\r
\r
if ( (sx <= (endRes-startRes)*av.charWidth) &&
\r
}
\r
\r
if ( (sx <= (endRes-startRes)*av.charWidth) &&
\r
- group.sequences.contains(av.alignment.getSequenceAt(
\r
+ group.getSequences(false).contains(av.alignment.getSequenceAt(
\r
i)))
\r
{
\r
if ( (bottom == -1) &&
\r
(i >= alHeight ||
\r
i)))
\r
{
\r
if ( (bottom == -1) &&
\r
(i >= alHeight ||
\r
- !group.sequences.contains(
\r
+ !group.getSequences(false).contains(
\r
av.alignment.getSequenceAt(i + 1))))
\r
{
\r
bottom = sy + av.charHeight;
\r
av.alignment.getSequenceAt(i + 1))))
\r
{
\r
bottom = sy + av.charHeight;
\r
@@
-533,7
+533,7
@@
public class SeqCanvas
if (!inGroup)
\r
{
\r
if (((top == -1) && (i == 0)) ||
\r
if (!inGroup)
\r
{
\r
if (((top == -1) && (i == 0)) ||
\r
- !group.sequences.contains(
\r
+ !group.getSequences(false).contains(
\r
av.alignment.getSequenceAt(i - 1)))
\r
{
\r
top = sy;
\r
av.alignment.getSequenceAt(i - 1)))
\r
{
\r
top = sy;
\r