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JAL-2388 Comment typo
[jalview.git]
/
src
/
jalview
/
appletgui
/
SequenceRenderer.java
diff --git
a/src/jalview/appletgui/SequenceRenderer.java
b/src/jalview/appletgui/SequenceRenderer.java
index
1c7c4ce
..
86d1f98
100755
(executable)
--- a/
src/jalview/appletgui/SequenceRenderer.java
+++ b/
src/jalview/appletgui/SequenceRenderer.java
@@
-83,7
+83,7
@@
public class SequenceRenderer implements jalview.api.SequenceRenderer
}
else if (av.getShowBoxes())
{
}
else if (av.getShowBoxes())
{
- getBoxColour(av.getViewportColourScheme(), seq, i);
+ getBoxColour(av.getResidueShading(), seq, i);
}
return resBoxColour;
}
return resBoxColour;
@@
-182,7
+182,7
@@
public class SequenceRenderer implements jalview.api.SequenceRenderer
}
else if (av.getShowBoxes())
{
}
else if (av.getShowBoxes())
{
- getBoxColour(av.getViewportColourScheme(), seq, i);
+ getBoxColour(av.getResidueShading(), seq, i);
}
}
}
}
@@
-272,7
+272,7
@@
public class SequenceRenderer implements jalview.api.SequenceRenderer
if (av.getColourText())
{
if (av.getColourText())
{
- getBoxColour(av.getViewportColourScheme(), seq, i);
+ getBoxColour(av.getResidueShading(), seq, i);
if (av.getShowBoxes())
{
graphics.setColor(resBoxColour.darker());
if (av.getShowBoxes())
{
graphics.setColor(resBoxColour.darker());