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boxes, colour text, show text added to groups
[jalview.git]
/
src
/
jalview
/
appletgui
/
SequenceRenderer.java
diff --git
a/src/jalview/appletgui/SequenceRenderer.java
b/src/jalview/appletgui/SequenceRenderer.java
index
a13b643
..
ea857cb
100755
(executable)
--- a/
src/jalview/appletgui/SequenceRenderer.java
+++ b/
src/jalview/appletgui/SequenceRenderer.java
@@
-66,6
+66,8
@@
public class SequenceRenderer
{
\r
if( currentSequenceGroup.getDisplayBoxes())
\r
getBoxColour(currentSequenceGroup.cs, seq, i);
\r
{
\r
if( currentSequenceGroup.getDisplayBoxes())
\r
getBoxColour(currentSequenceGroup.cs, seq, i);
\r
+ else
\r
+ resBoxColour = Color.white;
\r
}
\r
else if(av.getShowBoxes())
\r
getBoxColour(av.getGlobalColourScheme(), seq, i);
\r
}
\r
else if(av.getShowBoxes())
\r
getBoxColour(av.getGlobalColourScheme(), seq, i);
\r
@@
-101,7
+103,6
@@
public class SequenceRenderer
char s;
\r
// Need to find the sequence position here.
\r
\r
char s;
\r
// Need to find the sequence position here.
\r
\r
- graphics.setColor(Color.black);
\r
String sequence = seq.getSequence();
\r
for (int i = start; i <= end; i++)
\r
{
\r
String sequence = seq.getSequence();
\r
for (int i = start; i <= end; i++)
\r
{
\r
@@
-138,6
+139,8
@@
public class SequenceRenderer
else
\r
graphics.setColor(resBoxColour);
\r
}
\r
else
\r
graphics.setColor(resBoxColour);
\r
}
\r
+ else
\r
+ graphics.setColor(Color.black);
\r
}
\r
\r
charOffset = (width - fm.charWidth(s))/2;
\r
}
\r
\r
charOffset = (width - fm.charWidth(s))/2;
\r