import jalview.bin.JalviewLite;
import jalview.datamodel.AlignmentI;
import jalview.structure.StructureSelectionManager;
import jalview.bin.JalviewLite;
import jalview.datamodel.AlignmentI;
import jalview.structure.StructureSelectionManager;
final AlignViewport bottomViewport = bottomFrame.viewport;
final AlignmentI topAlignment = topViewport.getAlignment();
final AlignmentI bottomAlignment = bottomViewport.getAlignment();
final AlignViewport bottomViewport = bottomFrame.viewport;
final AlignmentI topAlignment = topViewport.getAlignment();
final AlignmentI bottomAlignment = bottomViewport.getAlignment();
: (!bottomAlignment.isNucleotide() ? bottomViewport : null);
boolean mapped = AlignmentUtils.mapProteinToCdna(
: (!bottomAlignment.isNucleotide() ? bottomViewport : null);
boolean mapped = AlignmentUtils.mapProteinToCdna(
panel.add(menuPanel, BorderLayout.NORTH);
panel.add(af.statusBar, BorderLayout.SOUTH);
panel.add(af.alignPanel, BorderLayout.CENTER);
panel.add(menuPanel, BorderLayout.NORTH);
panel.add(af.statusBar, BorderLayout.SOUTH);
panel.add(af.alignPanel, BorderLayout.CENTER);
int height = topFrame.frameHeight + bottomFrame.frameHeight;
jalview.bin.JalviewLite
.addFrame(this, this.getTitle(), width, height);
}
}
int height = topFrame.frameHeight + bottomFrame.frameHeight;
jalview.bin.JalviewLite
.addFrame(this, this.getTitle(), width, height);
}
}