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JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix delegate of
[jalview.git]
/
src
/
jalview
/
appletgui
/
TreePanel.java
diff --git
a/src/jalview/appletgui/TreePanel.java
b/src/jalview/appletgui/TreePanel.java
index
d3e6213
..
9ac6773
100644
(file)
--- a/
src/jalview/appletgui/TreePanel.java
+++ b/
src/jalview/appletgui/TreePanel.java
@@
-22,7
+22,7
@@
package jalview.appletgui;
import jalview.analysis.NJTree;
import jalview.analysis.scoremodels.ScoreModels;
import jalview.analysis.NJTree;
import jalview.analysis.scoremodels.ScoreModels;
-import jalview.api.analysis.ScoreModelI;
+import jalview.api.analysis.DistanceModelI;
import jalview.api.analysis.ViewBasedAnalysisI;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentView;
import jalview.api.analysis.ViewBasedAnalysisI;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentView;
@@
-237,7
+237,7
@@
public class TreePanel extends EmbmenuFrame implements ActionListener,
seqs = av.getSelectionGroup().getSequencesInOrder(
av.getAlignment());
}
seqs = av.getSelectionGroup().getSequencesInOrder(
av.getAlignment());
}
- ScoreModelI sm = ScoreModels.getInstance().forName(pwtype);
+ DistanceModelI sm = ScoreModels.getInstance().forName(pwtype);
if (sm instanceof ViewBasedAnalysisI)
{
try
if (sm instanceof ViewBasedAnalysisI)
{
try