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JAL-3253-applet JAL-3423 Windows TestNG
[jalview.git]
/
src
/
jalview
/
bin
/
Jalview.java
diff --git
a/src/jalview/bin/Jalview.java
b/src/jalview/bin/Jalview.java
index
b149911
..
f59c37f
100755
(executable)
--- a/
src/jalview/bin/Jalview.java
+++ b/
src/jalview/bin/Jalview.java
@@
-858,12
+858,12
@@
public class Jalview implements ApplicationSingletonI, JalviewJSApi
+ "] executed successfully!");
groovyscript = null;
}
+ "] executed successfully!");
groovyscript = null;
}
- while (aparser.getSize() > 0)
- {
- System.out.println("Unknown arg: " + aparser.nextValue());
- }
}
checkOutputFile(aparser, af, format);
}
checkOutputFile(aparser, af, format);
+ while (aparser.getSize() > 0)
+ {
+ System.out.println("Unknown arg: " + aparser.nextValue());
+ }
}
}
AlignFrame startUpAlframe = null;
}
}
AlignFrame startUpAlframe = null;
@@
-1052,6
+1052,8
@@
public class Jalview implements ApplicationSingletonI, JalviewJSApi
// biojsmsa filename
String outputFormat = aparser.nextValue();
String file = aparser.nextValue();
// biojsmsa filename
String outputFormat = aparser.nextValue();
String file = aparser.nextValue();
+ System.out.println("format " + outputFormat);
+
if (outputFormat.equalsIgnoreCase("png"))
{
af.createPNG(new File(file));
if (outputFormat.equalsIgnoreCase("png"))
{
af.createPNG(new File(file));