git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
formatting
[jalview.git]
/
src
/
jalview
/
bin
/
JalviewLite.java
diff --git
a/src/jalview/bin/JalviewLite.java
b/src/jalview/bin/JalviewLite.java
index
0cba50e
..
311e48d
100644
(file)
--- a/
src/jalview/bin/JalviewLite.java
+++ b/
src/jalview/bin/JalviewLite.java
@@
-1,6
+1,6
@@
/*
\r
* Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
\r
/*
\r
* Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
\r
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
\r
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
\r
*
\r
* This file is part of Jalview.
\r
*
\r
*
\r
* This file is part of Jalview.
\r
*
\r
@@
-492,6
+492,8
@@
public class JalviewLite extends Applet implements
boolean seqlimits = suffix.equalsIgnoreCase("true");
\r
if (alf.viewport.getSelectionGroup() != null)
\r
{
\r
boolean seqlimits = suffix.equalsIgnoreCase("true");
\r
if (alf.viewport.getSelectionGroup() != null)
\r
{
\r
+ // JBPNote: getSelectionAsNewSequence behaviour has changed - this method now returns a full copy of sequence data
\r
+ // TODO consider using getSequenceSelection instead here
\r
String reply = new AppletFormatAdapter().formatSequences(format,
\r
new Alignment(alf.viewport.getSelectionAsNewSequence()),
\r
seqlimits);
\r
String reply = new AppletFormatAdapter().formatSequences(format,
\r
new Alignment(alf.viewport.getSelectionAsNewSequence()),
\r
seqlimits);
\r