protected Vector groups = new Vector();\r
protected ArrayList superGroup = new ArrayList();\r
protected char gapCharacter = '-';\r
protected Vector groups = new Vector();\r
protected ArrayList superGroup = new ArrayList();\r
protected char gapCharacter = '-';\r
deleteSequence(oldseq);\r
\r
sequences.setElementAt(snew,i);\r
deleteSequence(oldseq);\r
\r
sequences.setElementAt(snew,i);\r