git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
update the copy constructor
[jalview.git]
/
src
/
jalview
/
datamodel
/
AlignmentAnnotation.java
diff --git
a/src/jalview/datamodel/AlignmentAnnotation.java
b/src/jalview/datamodel/AlignmentAnnotation.java
index
9de07dd
..
f5d34a6
100755
(executable)
--- a/
src/jalview/datamodel/AlignmentAnnotation.java
+++ b/
src/jalview/datamodel/AlignmentAnnotation.java
@@
-518,6
+518,10
@@
public class AlignmentAnnotation
this.label = annotation.label;
this.padGaps = annotation.padGaps;
this.visible = annotation.visible;
this.label = annotation.label;
this.padGaps = annotation.padGaps;
this.visible = annotation.visible;
+ this.centreColLabels=annotation.centreColLabels;
+ this.scaleColLabel=annotation.scaleColLabel;
+ this.showAllColLabels=annotation.showAllColLabels;
+ this.calcId = annotation.calcId;
if (this.hasScore = annotation.hasScore)
{
this.score = annotation.score;
if (this.hasScore = annotation.hasScore)
{
this.score = annotation.score;
@@
-567,6
+571,11
@@
public class AlignmentAnnotation
}
}
}
}
}
}
+ // TODO: check if we need to do this: JAL-952
+ //if (this.isrna=annotation.isrna)
+ {
+ // _rnasecstr=new SequenceFeature[annotation._rnasecstr];
+ }
validateRangeAndDisplay(); // construct hashcodes, etc.
}
validateRangeAndDisplay(); // construct hashcodes, etc.
}