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Send gapChar to print original Data
[jalview.git]
/
src
/
jalview
/
datamodel
/
AlignmentI.java
diff --git
a/src/jalview/datamodel/AlignmentI.java
b/src/jalview/datamodel/AlignmentI.java
index
e62c8c2
..
06e93d7
100755
(executable)
--- a/
src/jalview/datamodel/AlignmentI.java
+++ b/
src/jalview/datamodel/AlignmentI.java
@@
-270,5
+270,9
@@
public interface AlignmentI
public void adjustSequenceAnnotations();
\r
\r
public HiddenSequences getHiddenSequences();
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public void adjustSequenceAnnotations();
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\r
public HiddenSequences getHiddenSequences();
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-
\r
+ /**
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+ * Compact representation of alignment
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+ * @return CigarArray
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+ */
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+ public CigarArray getCompactAlignment();
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}
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}
\r