- return new Object[] { alignment, columnselection};
- } else {
- if (nvismsa.length!=1)
- throw new Error("Mismatch between visible blocks to update and number of contigs in view (contigs=0,blocks="+nvismsa.length);
- if (nvismsa[0]!=null)
- return new Object[] { nvismsa[0], new ColumnSelection()};
+ return new Object[]
+ {
+ alignment, columnselection};
+ }
+ else
+ {
+ if (nvismsa.length != 1)
+ {
+ throw new Error("Mismatch between visible blocks to update and number of contigs in view (contigs=0,blocks=" +
+ nvismsa.length);
+ }
+ if (nvismsa[0] != null)
+ {
+ return new Object[]
+ {
+ nvismsa[0], new ColumnSelection()};
+ }