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JAL-2416 better encapsulated 'constants' for BLOSUM62, PAM250
[jalview.git]
/
src
/
jalview
/
datamodel
/
BinarySequence.java
diff --git
a/src/jalview/datamodel/BinarySequence.java
b/src/jalview/datamodel/BinarySequence.java
index
a959cc7
..
90b8be7
100755
(executable)
--- a/
src/jalview/datamodel/BinarySequence.java
+++ b/
src/jalview/datamodel/BinarySequence.java
@@
-132,7
+132,7
@@
public class BinarySequence extends Sequence
: ResidueProperties.aaIndex, matrix.getMatrix());
}
: ResidueProperties.aaIndex, matrix.getMatrix());
}
- private void matrixEncode(final int[] aaIndex, final int[][] matrix)
+ private void matrixEncode(final int[] aaIndex, final float[][] matrix)
{
// Set all matrix to 0
// dbinary = new double[getSequence().length * 21];
{
// Set all matrix to 0
// dbinary = new double[getSequence().length * 21];