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Format changes
[jalview.git]
/
src
/
jalview
/
datamodel
/
BinarySequence.java
diff --git
a/src/jalview/datamodel/BinarySequence.java
b/src/jalview/datamodel/BinarySequence.java
index
423e401
..
af10e1d
100755
(executable)
--- a/
src/jalview/datamodel/BinarySequence.java
+++ b/
src/jalview/datamodel/BinarySequence.java
@@
-64,9
+64,7
@@
public class BinarySequence extends Sequence
\r
try
\r
{
\r
\r
try
\r
{
\r
- aanum = ((Integer) ResidueProperties.getAAHash().get(getSequence()
\r
- .substring(i,
\r
- i + 1))).intValue();
\r
+ aanum = ResidueProperties.aaIndex[getSequence().charAt(i)];
\r
}
\r
catch (NullPointerException e)
\r
{
\r
}
\r
catch (NullPointerException e)
\r
{
\r
@@
-101,9
+99,7
@@
public class BinarySequence extends Sequence
\r
try
\r
{
\r
\r
try
\r
{
\r
- aanum = ((Integer) ResidueProperties.getAAHash().get(getSequence()
\r
- .substring(i,
\r
- i + 1))).intValue();
\r
+ aanum = ResidueProperties.aaIndex[getSequence().charAt(i)];
\r
}
\r
catch (NullPointerException e)
\r
{
\r
}
\r
catch (NullPointerException e)
\r
{
\r