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removed autogenerated todo
[jalview.git]
/
src
/
jalview
/
datamodel
/
SequenceI.java
diff --git
a/src/jalview/datamodel/SequenceI.java
b/src/jalview/datamodel/SequenceI.java
index
64a21dd
..
5c15108
100755
(executable)
--- a/
src/jalview/datamodel/SequenceI.java
+++ b/
src/jalview/datamodel/SequenceI.java
@@
-182,10
+182,11
@@
public interface SequenceI
public int[] gapMap();
/**
public int[] gapMap();
/**
- * DOCUMENT ME!
+ * Delete a range of aligned sequence columns, creating a new dataset sequence if necessary
+ * and adjusting start and end positions accordingly.
*
*
- * @param i DOCUMENT ME!
- * @param j DOCUMENT ME!
+ * @param i first column in range to delete
+ * @param j last column in range to delete
*/
public void deleteChars(int i, int j);
*/
public void deleteChars(int i, int j);
@@
-243,6
+244,12
@@
public interface SequenceI
public DBRefEntry[] getDBRef();
public DBRefEntry[] getDBRef();
+ /**
+ * add the given entry to the list of DBRefs for this sequence,
+ * or replace a similar one if entry contains a map object
+ * and the existing one doesnt.
+ * @param entry
+ */
public void addDBRef(DBRefEntry entry);
public void addSequenceFeature(SequenceFeature sf);
public void addDBRef(DBRefEntry entry);
public void addSequenceFeature(SequenceFeature sf);