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Merge branch 'develop' into features/JAL-2446NCList
[jalview.git]
/
src
/
jalview
/
datamodel
/
SequenceI.java
diff --git
a/src/jalview/datamodel/SequenceI.java
b/src/jalview/datamodel/SequenceI.java
index
dbf3ed3
..
cf9d6ad
100755
(executable)
--- a/
src/jalview/datamodel/SequenceI.java
+++ b/
src/jalview/datamodel/SequenceI.java
@@
-22,6
+22,7
@@
package jalview.datamodel;
import jalview.datamodel.features.SequenceFeaturesI;
import jalview.datamodel.features.SequenceFeaturesI;
+import java.util.BitSet;
import java.util.List;
import java.util.Vector;
import java.util.List;
import java.util.Vector;
@@
-520,4
+521,11
@@
public interface SequenceI extends ASequenceI
* @return
*/
List<SequenceFeature> findFeatures(int from, int to, String... types);
* @return
*/
List<SequenceFeature> findFeatures(int from, int to, String... types);
+
+ /**
+ *
+ * @return BitSet corresponding to index [0,length) where Comparison.isGap()
+ * returns true.
+ */
+ BitSet getInsertionsAsBits();
}
}